Module name: preyprey-subset

Subset a ProHits-viz interactive file to grab a cluster

parameters	definition	default
genes	list of gene names that identify the cluster
heatmap	.tsv file from ProHits-viz
outFile	output list of gene names	cluster.tsv

Example file formats

genes

WDR3
NOP56
DKC1
NOLC1
TCOF1
URB1
DHX33
TRMT1L

heatmap

row	column	value	params
SNAP29	SNAP29	1	{"type": "heatmap", "kind": "Prey vs prey", "xAxis": "Prey", "yAxis": "Prey", "filterType": 0, "abundance": "Correlation - Spec"}
SNAP29	PALD1	0.571787038973909	
SNAP29	APBB1	0.621831039504651	
SNAP29	EHBP1	0.619991568749013	
SNAP29	KCNB2	0.392832468690144	
SNAP29	UBA52	0.557246514867496	
SNAP29	VANGL2	0.59688567365931	

Output

• tsv file for input to ProHits-viz viewer